crispio

• crispio package
  • Submodules
  • crispio.annotate module
    • annotate_from_gff()
  • crispio.cli module
    • main()
  • crispio.crosstalk module
  • crispio.features module
    • featurize()
    • get_context()
    • get_features()
  • crispio.fitness module
  • crispio.map module
    • GuideLibrary
      • GuideLibrary.genome
      • GuideLibrary.guide_matches
      • GuideLibrary.as_gff()
      • GuideLibrary.from_generating()
      • GuideLibrary.from_mapping()
      • GuideLibrary.genome
      • GuideLibrary.guide_matches
    • GuideMatch
      • GuideMatch.pam_search
      • GuideMatch.guide_seq
      • GuideMatch.pam_seq
      • GuideMatch.pam_start
      • GuideMatch.pam_end
      • GuideMatch.length
      • GuideMatch.as_dict()
      • GuideMatch.guide_context_down
      • GuideMatch.guide_context_up
      • GuideMatch.guide_end
      • GuideMatch.guide_seq
      • GuideMatch.guide_start
      • GuideMatch.length
      • GuideMatch.pam_end
      • GuideMatch.pam_search
      • GuideMatch.pam_seq
      • GuideMatch.pam_start
      • GuideMatch.reverse
    • GuideMatchCollection
      • GuideMatchCollection.guide_seq
      • GuideMatchCollection.pam_search
      • GuideMatchCollection.matches
      • GuideMatchCollection.guide_name
      • GuideMatchCollection.from_search()
      • GuideMatchCollection.guide_name
      • GuideMatchCollection.guide_seq
      • GuideMatchCollection.matches
      • GuideMatchCollection.pam_search
  • crispio.plot module
  • crispio.utils module
    • SequenceCollection
      • SequenceCollection.pams
      • SequenceCollection.scaffolds
  • Module contents